Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2A1O14983 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.24■□□□□ 0.67
ATP2A1O14983 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.24■□□□□ 0.67
ATP2A1O14983 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATP2A1O14983 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.24■□□□□ 0.67
ATP2A1O14983 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATP2A1O14983 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
ATP2A1O14983 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2A1O14983 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2A1O14983 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2A1O14983 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ATP2A1O14983 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ATP2A1O14983 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2A1O14983 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2A1O14983 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2A1O14983 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.24■□□□□ 0.67
ATP2A1O14983 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2A1O14983 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATP2A1O14983 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ATP2A1O14983 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A1O14983 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ATP2A1O14983 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP2A1O14983 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A1O14983 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A1O14983 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP2A1O14983 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A1O14983 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A1O14983 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ATP2A1O14983 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A1O14983 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A1O14983 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A1O14983 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.23■□□□□ 0.67
ATP2A1O14983 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A1O14983 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.23■□□□□ 0.67
ATP2A1O14983 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ATP2A1O14983 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ATP2A1O14983 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP2A1O14983 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.23■□□□□ 0.67
ATP2A1O14983 ALG1L8P-201ENST00000533887 760 ntBASIC19.23■□□□□ 0.67
ATP2A1O14983 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A1O14983 AC140878.1-201ENST00000565277 250 ntBASIC19.23■□□□□ 0.67
ATP2A1O14983 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.23■□□□□ 0.67
ATP2A1O14983 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.23■□□□□ 0.67
ATP2A1O14983 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.23■□□□□ 0.67
ATP2A1O14983 AJ011932.1-201ENST00000621707 465 ntBASIC19.23■□□□□ 0.67
ATP2A1O14983 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.23■□□□□ 0.67
ATP2A1O14983 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.23■□□□□ 0.67
ATP2A1O14983 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A1O14983 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A1O14983 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ATP2A1O14983 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A1O14983 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A1O14983 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP2A1O14983 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A1O14983 AC008677.1-201ENST00000519230 1561 ntBASIC19.23■□□□□ 0.67
ATP2A1O14983 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ATP2A1O14983 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP2A1O14983 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP2A1O14983 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.22■□□□□ 0.67
ATP2A1O14983 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP2A1O14983 AC107890.1-201ENST00000422478 521 ntBASIC19.22■□□□□ 0.67
ATP2A1O14983 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP2A1O14983 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP2A1O14983 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.22■□□□□ 0.67
ATP2A1O14983 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ATP2A1O14983 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP2A1O14983 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.22■□□□□ 0.67
ATP2A1O14983 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
ATP2A1O14983 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP2A1O14983 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP2A1O14983 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A1O14983 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.21■□□□□ 0.67
ATP2A1O14983 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ATP2A1O14983 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP2A1O14983 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A1O14983 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A1O14983 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A1O14983 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ATP2A1O14983 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A1O14983 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A1O14983 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
ATP2A1O14983 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms