Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.02■□□□□ 0.32
TRIM38O00635 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRIM38O00635 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM38O00635 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM38O00635 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM38O00635 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRIM38O00635 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM38O00635 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
TRIM38O00635 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM38O00635 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM38O00635 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM38O00635 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM38O00635 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM38O00635 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM38O00635 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
TRIM38O00635 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM38O00635 IGLL3P-201ENST00000412472 434 ntBASIC17.02■□□□□ 0.32
TRIM38O00635 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.02■□□□□ 0.32
TRIM38O00635 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.02■□□□□ 0.32
TRIM38O00635 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TRIM38O00635 STK25P1-201ENST00000585406 838 ntBASIC17.02■□□□□ 0.32
TRIM38O00635 LINC01451-201ENST00000623792 534 ntBASIC17.02■□□□□ 0.32
TRIM38O00635 C20orf181-201ENST00000623918 480 ntBASIC17.02■□□□□ 0.32
TRIM38O00635 AC009949.1-201ENST00000623048 1830 ntBASIC17.02■□□□□ 0.31
TRIM38O00635 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM38O00635 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TRIM38O00635 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.02■□□□□ 0.31
TRIM38O00635 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM38O00635 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM38O00635 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
TRIM38O00635 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM38O00635 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM38O00635 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
TRIM38O00635 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM38O00635 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM38O00635 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM38O00635 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRIM38O00635 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM38O00635 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM38O00635 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRIM38O00635 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM38O00635 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM38O00635 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM38O00635 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM38O00635 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TRIM38O00635 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM38O00635 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM38O00635 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM38O00635 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TRIM38O00635 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM38O00635 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM38O00635 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM38O00635 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM38O00635 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
TRIM38O00635 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
TRIM38O00635 HTR5BP-201ENST00000430851 1154 ntBASIC17.01■□□□□ 0.31
TRIM38O00635 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM38O00635 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM38O00635 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM38O00635 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM38O00635 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM38O00635 SNHG9-202ENST00000564014 471 ntBASIC17.01■□□□□ 0.31
TRIM38O00635 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
TRIM38O00635 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM38O00635 AL078644.1-201ENST00000609881 752 ntBASIC17.01■□□□□ 0.31
TRIM38O00635 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRIM38O00635 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
TRIM38O00635 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM38O00635 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM38O00635 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM38O00635 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM38O00635 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM38O00635 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM38O00635 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM38O00635 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM38O00635 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM38O00635 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM38O00635 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM38O00635 GPR89P-201ENST00000407924 1495 ntBASIC17■□□□□ 0.31
TRIM38O00635 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM38O00635 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM38O00635 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM38O00635 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM38O00635 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17■□□□□ 0.31
TRIM38O00635 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM38O00635 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17■□□□□ 0.31
TRIM38O00635 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM38O00635 METTL21AP1-201ENST00000438852 635 ntBASIC17■□□□□ 0.31
TRIM38O00635 STK19B-204ENST00000512515 211 ntBASIC17■□□□□ 0.31
TRIM38O00635 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17■□□□□ 0.31
TRIM38O00635 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17■□□□□ 0.31
TRIM38O00635 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRIM38O00635 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17■□□□□ 0.31
TRIM38O00635 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17■□□□□ 0.31
TRIM38O00635 AC116407.2-201ENST00000613639 860 ntBASIC17■□□□□ 0.31
TRIM38O00635 AL805961.1-202ENST00000641562 540 ntBASIC17■□□□□ 0.31
TRIM38O00635 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRIM38O00635 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17■□□□□ 0.31
TRIM38O00635 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17■□□□□ 0.31
TRIM38O00635 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms