Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SNHG9-202ENST00000564014 471 ntBASIC18.95■□□□□ 0.62
DDX39AO00148 AC091167.2-201ENST00000579581 588 ntBASIC18.95■□□□□ 0.62
DDX39AO00148 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX39AO00148 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.95■□□□□ 0.62
DDX39AO00148 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX39AO00148 AL121761.2-201ENST00000598007 1648 ntBASIC18.95■□□□□ 0.62
DDX39AO00148 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX39AO00148 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX39AO00148 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
DDX39AO00148 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.95■□□□□ 0.62
DDX39AO00148 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
DDX39AO00148 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
DDX39AO00148 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
DDX39AO00148 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
DDX39AO00148 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX39AO00148 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
DDX39AO00148 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX39AO00148 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
DDX39AO00148 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX39AO00148 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
DDX39AO00148 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX39AO00148 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX39AO00148 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.94■□□□□ 0.62
DDX39AO00148 AP006288.1-201ENST00000446065 395 ntBASIC18.94■□□□□ 0.62
DDX39AO00148 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.94■□□□□ 0.62
DDX39AO00148 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.94■□□□□ 0.62
DDX39AO00148 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
DDX39AO00148 AC087641.1-201ENST00000557561 1021 ntBASIC18.94■□□□□ 0.62
DDX39AO00148 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.94■□□□□ 0.62
DDX39AO00148 AC099522.2-201ENST00000607001 744 ntBASIC18.94■□□□□ 0.62
DDX39AO00148 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.94■□□□□ 0.62
DDX39AO00148 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX39AO00148 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
DDX39AO00148 AC079781.4-201ENST00000641908 219 ntBASIC18.94■□□□□ 0.62
DDX39AO00148 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX39AO00148 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX39AO00148 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX39AO00148 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX39AO00148 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX39AO00148 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.94■□□□□ 0.62
DDX39AO00148 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.94■□□□□ 0.62
DDX39AO00148 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.94■□□□□ 0.62
DDX39AO00148 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.94■□□□□ 0.62
DDX39AO00148 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.93■□□□□ 0.62
DDX39AO00148 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
DDX39AO00148 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.93■□□□□ 0.62
DDX39AO00148 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
DDX39AO00148 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
DDX39AO00148 AC002056.1-201ENST00000395613 760 ntBASIC18.93■□□□□ 0.62
DDX39AO00148 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.93■□□□□ 0.62
DDX39AO00148 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
DDX39AO00148 HCG4-201ENST00000418983 998 ntBASIC18.93■□□□□ 0.62
DDX39AO00148 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.93■□□□□ 0.62
DDX39AO00148 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.93■□□□□ 0.62
DDX39AO00148 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.93■□□□□ 0.62
DDX39AO00148 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.93■□□□□ 0.62
DDX39AO00148 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.93■□□□□ 0.62
DDX39AO00148 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.93■□□□□ 0.62
DDX39AO00148 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
DDX39AO00148 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
DDX39AO00148 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
DDX39AO00148 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
DDX39AO00148 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.93■□□□□ 0.62
DDX39AO00148 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
DDX39AO00148 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
DDX39AO00148 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX39AO00148 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.93■□□□□ 0.62
DDX39AO00148 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX39AO00148 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX39AO00148 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
DDX39AO00148 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.92■□□□□ 0.62
DDX39AO00148 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX39AO00148 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
DDX39AO00148 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX39AO00148 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX39AO00148 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX39AO00148 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX39AO00148 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
DDX39AO00148 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX39AO00148 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.92■□□□□ 0.62
DDX39AO00148 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms