Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 AL049637.2-201ENST00000641778 930 ntBASIC12.39□□□□□ -0.43
SMKR1H3BMG3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 AC096633.1-201ENST00000422446 749 ntBASIC12.38□□□□□ -0.43
SMKR1H3BMG3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 C2orf69P3-201ENST00000565542 1120 ntBASIC12.38□□□□□ -0.43
SMKR1H3BMG3 MIR4651-201ENST00000582622 73 ntBASIC12.38□□□□□ -0.43
SMKR1H3BMG3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 AC006538.1-201ENST00000567905 1585 ntBASIC12.38□□□□□ -0.43
SMKR1H3BMG3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMKR1H3BMG3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.37□□□□□ -0.43
SMKR1H3BMG3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 AC073347.1-201ENST00000421633 2643 ntBASIC12.37□□□□□ -0.43
SMKR1H3BMG3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 COX5BP2-201ENST00000392354 334 ntBASIC12.37□□□□□ -0.43
SMKR1H3BMG3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 MIR1238-201ENST00000408483 83 ntBASIC12.37□□□□□ -0.43
SMKR1H3BMG3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 MTCL1P1-201ENST00000446207 792 ntBASIC12.37□□□□□ -0.43
SMKR1H3BMG3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 AP001412.1-201ENST00000608405 714 ntBASIC12.37□□□□□ -0.43
SMKR1H3BMG3 AC019129.2-201ENST00000609837 1235 ntBASIC12.37□□□□□ -0.43
SMKR1H3BMG3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SMKR1H3BMG3 ME2P1-201ENST00000426028 1970 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms