Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 HTR5BP-201ENST00000430851 1154 ntBASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 AL031055.1-201ENST00000606362 631 ntBASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
YJEFN3A6XGL0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 AC005829.1-201ENST00000570002 483 ntBASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 MIR3687-2-201ENST00000577708 61 ntBASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 AL009183.1-201ENST00000603760 355 ntBASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 MIR3687-1-201ENST00000614492 61 ntBASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 AC055717.3-201ENST00000622967 595 ntBASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 AC092902.6-201ENST00000641783 218 ntBASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YJEFN3A6XGL0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YJEFN3A6XGL0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YJEFN3A6XGL0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.52■□□□□ 0.4
YJEFN3A6XGL0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YJEFN3A6XGL0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YJEFN3A6XGL0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.52■□□□□ 0.4
YJEFN3A6XGL0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YJEFN3A6XGL0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YJEFN3A6XGL0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YJEFN3A6XGL0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
YJEFN3A6XGL0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
YJEFN3A6XGL0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.52■□□□□ 0.4
YJEFN3A6XGL0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.52■□□□□ 0.4
YJEFN3A6XGL0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
YJEFN3A6XGL0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YJEFN3A6XGL0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YJEFN3A6XGL0 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms