Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 VN2R19P-201ENST00000442399 1052 ntBASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 DNAJB3-201ENST00000446806 729 ntBASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 MIR3687-2-201ENST00000577708 61 ntBASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 MIR3687-1-201ENST00000614492 61 ntBASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 AC055717.3-201ENST00000622967 595 ntBASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 AC004832.2-201ENST00000426397 482 ntBASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 AL691403.2-201ENST00000618460 490 ntBASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPDC1A2A3K4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 AC112482.1-201ENST00000492080 688 ntBASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 AC018845.2-201ENST00000568326 409 ntBASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.83■□□□□ 0.77
PTPDC1A2A3K4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
PTPDC1A2A3K4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPDC1A2A3K4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.83■□□□□ 0.76
PTPDC1A2A3K4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPDC1A2A3K4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
PTPDC1A2A3K4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPDC1A2A3K4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PTPDC1A2A3K4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
PTPDC1A2A3K4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PTPDC1A2A3K4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 MRPL20P1-201ENST00000400819 433 ntBASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 PRSS29P-201ENST00000440800 595 ntBASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 AL603756.1-201ENST00000606511 2163 ntBASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms