Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 MIR662-201ENST00000384847 95 ntBASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 SPDYE15P-201ENST00000424157 909 ntBASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 AC092597.1-201ENST00000487352 616 ntBASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 AC122714.2-201ENST00000502787 707 ntBASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 AL138966.2-201ENST00000621997 464 ntBASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 AC005052.1-201ENST00000625181 2492 ntBASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 DBET-201ENST00000630918 3363 ntBASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 AC005332.3-201ENST00000589904 676 ntBASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 LINC01568-207ENST00000641790 1380 ntBASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV18A0A075B6X5 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV18A0A075B6X5 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms