Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 AC124947.2-201ENST00000547118 1133 ntBASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB3Q9Y5G1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB3Q9Y5G1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
PCDHGB3Q9Y5G1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB3Q9Y5G1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PCDHGB3Q9Y5G1 RNF216P1-203ENST00000404404 2427 ntBASIC16.08■□□□□ 0.17
PCDHGB3Q9Y5G1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB3Q9Y5G1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB3Q9Y5G1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB3Q9Y5G1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGB3Q9Y5G1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
PCDHGB3Q9Y5G1 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 AC078925.2-201ENST00000624013 1973 ntBASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 EGFEM1P-202ENST00000431685 1563 ntBASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGB3Q9Y5G1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 SPDYE21P-201ENST00000413323 827 ntBASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 AC132008.2-207ENST00000454517 770 ntBASIC16.07■□□□□ 0.16
PCDHGB3Q9Y5G1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms