Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 AL139400.1-201ENST00000366220 510 ntBASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 AL671277.1-201ENST00000429656 993 ntBASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 AC092919.2-201ENST00000623631 1645 ntBASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 SPDYE11-202ENST00000450699 704 ntBASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 RN7SL589P-201ENST00000481268 310 ntBASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 SPDYE9P-201ENST00000570642 692 ntBASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 MIR4515-201ENST00000584082 81 ntBASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 SPDYE10P-202ENST00000612005 668 ntBASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 SPDYE8P-202ENST00000612377 668 ntBASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 GNAS-203ENST00000306120 1878 ntBASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSX2IPQ9Y2D8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 FAM8A3P-201ENST00000427218 844 ntBASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 TIMM8BP1-201ENST00000452384 211 ntBASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 LINC00628-201ENST00000628516 1289 ntBASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 AC009053.2-201ENST00000563701 2365 ntBASIC18.15■□□□□ 0.5
SSX2IPQ9Y2D8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms