Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 AC005915.1-201ENST00000624912 2018 ntBASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 AC092902.6-201ENST00000641783 218 ntBASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDZRN3Q9UPQ7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 LINC02012-201ENST00000608206 1725 ntBASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 AC004461.1-201ENST00000412461 403 ntBASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 PAWRP1-201ENST00000451083 565 ntBASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 AC093525.9-201ENST00000624961 1746 ntBASIC21.75■■□□□ 1.07
PDZRN3Q9UPQ7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 AC015911.4-201ENST00000588022 1070 ntBASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 AC068137.2-201ENST00000605408 478 ntBASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 AC093512.1-201ENST00000617969 520 ntBASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDZRN3Q9UPQ7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 FLJ38576-201ENST00000623820 2459 ntBASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 AC092474.2-201ENST00000424288 719 ntBASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 IGHV3-52-201ENST00000519770 353 ntBASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
PDZRN3Q9UPQ7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 AC105020.1-201ENST00000435356 2205 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms