Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 HMGA1P7-201ENST00000406908 502 ntBASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 KRT18P58-201ENST00000527480 1120 ntBASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 AC007064.4-201ENST00000637740 555 ntBASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 AL671710.1-201ENST00000610245 2349 ntBASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 BCAR1-209ENST00000546196 1340 ntBASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 MIR940-201ENST00000401276 94 ntBASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 AL031432.2-201ENST00000566714 459 ntBASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 AL928711.1-201ENST00000570165 459 ntBASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 AC025580.3-201ENST00000617932 1424 ntBASIC19.25■□□□□ 0.67
PCDHA4Q9UN74 HLA-A-202ENST00000376806 1854 ntBASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 HLA-J-202ENST00000469281 1241 ntBASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 KRT19P2-202ENST00000557173 1012 ntBASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHA4Q9UN74 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 AC006538.1-201ENST00000567905 1585 ntBASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.23■□□□□ 0.67
PCDHA4Q9UN74 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms