Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 AC023824.1-201ENST00000562945 2975 ntBASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 AF186996.4-201ENST00000467186 377 ntBASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00474Q9P2X8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
LINC00474Q9P2X8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC11.08□□□□□ -0.63
LINC00474Q9P2X8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC11.08□□□□□ -0.63
LINC00474Q9P2X8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC11.08□□□□□ -0.63
LINC00474Q9P2X8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 AC139887.3-201ENST00000568585 713 ntBASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 AC006557.2-201ENST00000592985 1240 ntBASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 AP001269.4-201ENST00000609611 512 ntBASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms