Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 AL645728.1-201ENST00000366221 2101 ntBASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 AC087641.1-201ENST00000557561 1021 ntBASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 CYP2A7P1-201ENST00000595391 815 ntBASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 AC055717.3-201ENST00000622967 595 ntBASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 C20orf181-201ENST00000623918 480 ntBASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SPHK1Q9NYA1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 HTR5BP-201ENST00000430851 1154 ntBASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 FAM58CP-201ENST00000435741 640 ntBASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 MIR3687-2-201ENST00000577708 61 ntBASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 MIR3687-1-201ENST00000614492 61 ntBASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 AC091812.2-201ENST00000619081 385 ntBASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPHK1Q9NYA1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 AL671710.1-201ENST00000610245 2349 ntBASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 AC006277.1-201ENST00000624348 1610 ntBASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 MIR1233-2-201ENST00000408138 82 ntBASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 MIR1233-1-201ENST00000408722 82 ntBASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 AC140658.5-201ENST00000438532 169 ntBASIC16.21■□□□□ 0.19
SPHK1Q9NYA1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms