Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC140113.2-201ENST00000604370 208 ntBASIC17.99■□□□□ 0.47
CISHQ9NSE2 AC027601.4-201ENST00000611259 610 ntBASIC17.99■□□□□ 0.47
CISHQ9NSE2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.99■□□□□ 0.47
CISHQ9NSE2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CISHQ9NSE2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.99■□□□□ 0.47
CISHQ9NSE2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.99■□□□□ 0.47
CISHQ9NSE2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CISHQ9NSE2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CISHQ9NSE2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
CISHQ9NSE2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CISHQ9NSE2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 HCG4-201ENST00000418983 998 ntBASIC17.98■□□□□ 0.47
CISHQ9NSE2 MED15P5-201ENST00000423150 992 ntBASIC17.98■□□□□ 0.47
CISHQ9NSE2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 AP000347.1-202ENST00000435868 847 ntBASIC17.98■□□□□ 0.47
CISHQ9NSE2 AL591424.1-201ENST00000442569 1213 ntBASIC17.98■□□□□ 0.47
CISHQ9NSE2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 AC087641.1-201ENST00000557561 1021 ntBASIC17.98■□□□□ 0.47
CISHQ9NSE2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 AC018845.2-201ENST00000568326 409 ntBASIC17.98■□□□□ 0.47
CISHQ9NSE2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CISHQ9NSE2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CISHQ9NSE2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.97■□□□□ 0.47
CISHQ9NSE2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CISHQ9NSE2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.97■□□□□ 0.47
CISHQ9NSE2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.97■□□□□ 0.47
CISHQ9NSE2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CISHQ9NSE2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.97■□□□□ 0.47
CISHQ9NSE2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 KRT18P3-201ENST00000451602 1288 ntBASIC17.97■□□□□ 0.47
CISHQ9NSE2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.97■□□□□ 0.47
CISHQ9NSE2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CISHQ9NSE2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 MIR4515-201ENST00000584082 81 ntBASIC17.97■□□□□ 0.47
CISHQ9NSE2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.97■□□□□ 0.47
CISHQ9NSE2 CYP2A7P1-201ENST00000595391 815 ntBASIC17.97■□□□□ 0.47
CISHQ9NSE2 FAM197Y3-203ENST00000618346 717 ntBASIC17.97■□□□□ 0.47
CISHQ9NSE2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.97■□□□□ 0.47
CISHQ9NSE2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.97■□□□□ 0.47
CISHQ9NSE2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.97■□□□□ 0.47
CISHQ9NSE2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.97■□□□□ 0.47
CISHQ9NSE2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CISHQ9NSE2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms