Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CDC42SE2Q9NRR3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 AP002414.1-201ENST00000391405 1147 ntBASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 AP005901.3-202ENST00000581653 237 ntBASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 PC-204ENST00000524491 1714 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
CDC42SE2Q9NRR3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 AC097637.2-201ENST00000624096 1997 ntBASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 AC148477.5-201ENST00000625164 1645 ntBASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 MINOS1P3-201ENST00000457048 203 ntBASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 DUX4L26-201ENST00000489078 1255 ntBASIC11.65□□□□□ -0.54
CDC42SE2Q9NRR3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms