Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 MTND2P9-201ENST00000422293 931 ntBASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 MEIS3P1-201ENST00000495167 958 ntBASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 AC011467.2-201ENST00000598425 242 ntBASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 AL353729.2-201ENST00000605859 1249 ntBASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 AJ011932.1-201ENST00000621707 465 ntBASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF1Q9H7N4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 GAPDHP21-201ENST00000450301 1010 ntBASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 SIGLEC30P-201ENST00000455569 941 ntBASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 AC093214.1-201ENST00000511688 1107 ntBASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 AC087641.1-201ENST00000557561 1021 ntBASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 TK1-204ENST00000590430 683 ntTSL 3 BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 AC021321.1-201ENST00000607397 1113 ntBASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 ANKRD20A8P-203ENST00000641373 517 ntBASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 REXO1L9P-201ENST00000604264 2108 ntBASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SCAF1Q9H7N4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 RSL24D1P2-201ENST00000445584 366 ntBASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 RN7SL371P-201ENST00000578099 267 ntBASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 AP000867.4-201ENST00000641616 219 ntBASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
SCAF1Q9H7N4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCAF1Q9H7N4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SCAF1Q9H7N4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC25.29■■□□□ 1.64
SCAF1Q9H7N4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCAF1Q9H7N4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC25.29■■□□□ 1.64
SCAF1Q9H7N4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms