Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM2Q9C040 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM2Q9C040 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
TRIM2Q9C040 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM2Q9C040 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM2Q9C040 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM2Q9C040 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM2Q9C040 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM2Q9C040 MTDHP3-201ENST00000594186 672 ntBASIC15.58■□□□□ 0.08
TRIM2Q9C040 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM2Q9C040 AL589182.2-201ENST00000619332 1049 ntBASIC15.58■□□□□ 0.08
TRIM2Q9C040 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM2Q9C040 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRIM2Q9C040 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM2Q9C040 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM2Q9C040 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM2Q9C040 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRIM2Q9C040 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM2Q9C040 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM2Q9C040 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM2Q9C040 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
TRIM2Q9C040 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM2Q9C040 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM2Q9C040 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
TRIM2Q9C040 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM2Q9C040 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM2Q9C040 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM2Q9C040 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 SAPCD2P3-201ENST00000455031 850 ntBASIC15.57■□□□□ 0.08
TRIM2Q9C040 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 DUX4L17-201ENST00000557360 1267 ntBASIC15.57■□□□□ 0.08
TRIM2Q9C040 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 TERC-201ENST00000602385 541 ntBASIC15.57■□□□□ 0.08
TRIM2Q9C040 AL121912.1-201ENST00000603683 238 ntBASIC15.57■□□□□ 0.08
TRIM2Q9C040 REXO1L6P-202ENST00000619970 1078 ntBASIC15.57■□□□□ 0.08
TRIM2Q9C040 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRIM2Q9C040 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM2Q9C040 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM2Q9C040 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM2Q9C040 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM2Q9C040 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.56■□□□□ 0.08
TRIM2Q9C040 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM2Q9C040 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM2Q9C040 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM2Q9C040 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
TRIM2Q9C040 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM2Q9C040 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM2Q9C040 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM2Q9C040 AKR1C7P-201ENST00000305623 895 ntBASIC15.56■□□□□ 0.08
TRIM2Q9C040 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM2Q9C040 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM2Q9C040 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM2Q9C040 AP002469.2-201ENST00000531724 424 ntBASIC15.56■□□□□ 0.08
TRIM2Q9C040 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM2Q9C040 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRIM2Q9C040 AC064862.7-201ENST00000604520 867 ntBASIC15.56■□□□□ 0.08
TRIM2Q9C040 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM2Q9C040 AL355877.3-201ENST00000622820 899 ntBASIC15.56■□□□□ 0.08
TRIM2Q9C040 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
TRIM2Q9C040 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms