Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 AKR1C7P-201ENST00000305623 895 ntBASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 TERC-201ENST00000602385 541 ntBASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 AL121772.3-201ENST00000610840 674 ntBASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 AC005052.1-201ENST00000625181 2492 ntBASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 AC008608.2-201ENST00000606089 416 ntBASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.17■□□□□ 0.82
UPF3BQ9BZI7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 AC091304.2-201ENST00000564639 760 ntBASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 AL139424.1-201ENST00000607572 797 ntBASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF3BQ9BZI7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.15■□□□□ 0.82
UPF3BQ9BZI7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms