Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SLC38A3Q99624 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SLC38A3Q99624 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC38A3Q99624 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC38A3Q99624 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC38A3Q99624 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.34■□□□□ 0.21
SLC38A3Q99624 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 AC004449.1-201ENST00000564240 433 ntBASIC16.34■□□□□ 0.21
SLC38A3Q99624 AC091167.2-201ENST00000579581 588 ntBASIC16.34■□□□□ 0.21
SLC38A3Q99624 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 AL355385.1-201ENST00000606123 409 ntBASIC16.34■□□□□ 0.21
SLC38A3Q99624 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.34■□□□□ 0.21
SLC38A3Q99624 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC38A3Q99624 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SLC38A3Q99624 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC38A3Q99624 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SLC38A3Q99624 FRMD8P1-201ENST00000440433 1524 ntBASIC16.34■□□□□ 0.21
SLC38A3Q99624 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SLC38A3Q99624 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SLC38A3Q99624 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC38A3Q99624 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC38A3Q99624 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.33■□□□□ 0.21
SLC38A3Q99624 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SLC38A3Q99624 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SLC38A3Q99624 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC38A3Q99624 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC38A3Q99624 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC38A3Q99624 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
SLC38A3Q99624 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC38A3Q99624 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC38A3Q99624 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SLC38A3Q99624 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC38A3Q99624 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC38A3Q99624 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC38A3Q99624 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC38A3Q99624 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC38A3Q99624 AC067852.2-201ENST00000590513 2313 ntBASIC16.33■□□□□ 0.2
SLC38A3Q99624 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SLC38A3Q99624 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC38A3Q99624 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC38A3Q99624 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SLC38A3Q99624 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC38A3Q99624 TFAMP1-201ENST00000412727 736 ntBASIC16.33■□□□□ 0.2
SLC38A3Q99624 AL645939.2-201ENST00000427340 991 ntBASIC16.33■□□□□ 0.2
SLC38A3Q99624 RN7SL589P-201ENST00000481268 310 ntBASIC16.33■□□□□ 0.2
SLC38A3Q99624 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC38A3Q99624 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SLC38A3Q99624 AC087641.1-201ENST00000557561 1021 ntBASIC16.33■□□□□ 0.2
SLC38A3Q99624 RARRES2P8-201ENST00000566335 367 ntBASIC16.33■□□□□ 0.2
SLC38A3Q99624 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC38A3Q99624 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC38A3Q99624 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SLC38A3Q99624 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC38A3Q99624 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC38A3Q99624 AC099398.1-201ENST00000567919 2776 ntBASIC16.33■□□□□ 0.2
SLC38A3Q99624 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SLC38A3Q99624 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC38A3Q99624 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC38A3Q99624 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC38A3Q99624 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SLC38A3Q99624 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC38A3Q99624 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SLC38A3Q99624 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SLC38A3Q99624 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC38A3Q99624 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SLC38A3Q99624 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SLC38A3Q99624 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC38A3Q99624 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC38A3Q99624 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC38A3Q99624 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 ADH5P3-201ENST00000433842 1137 ntBASIC16.32■□□□□ 0.2
SLC38A3Q99624 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms