Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 GOLGA2P4-201ENST00000441462 777 ntBASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 MIR4515-201ENST00000584082 81 ntBASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 RNA5SP412-201ENST00000516234 123 ntBASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 AC092978.1-202ENST00000637590 1327 ntBASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 AC098850.1-201ENST00000419919 790 ntBASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.21□□□□□ -0.13
CSMD1Q96PZ7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CSMD1Q96PZ7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CSMD1Q96PZ7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CSMD1Q96PZ7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CSMD1Q96PZ7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.21□□□□□ -0.14
CSMD1Q96PZ7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CSMD1Q96PZ7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CSMD1Q96PZ7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CSMD1Q96PZ7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CSMD1Q96PZ7 AC027307.2-201ENST00000591252 911 ntBASIC14.21□□□□□ -0.14
CSMD1Q96PZ7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.21□□□□□ -0.14
CSMD1Q96PZ7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 DOC2GP-202ENST00000514950 1163 ntBASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 AC026740.1-201ENST00000607068 791 ntBASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 PDIA3P1-201ENST00000471856 1510 ntBASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
CSMD1Q96PZ7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms