Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 MIR4785-201ENST00000585005 73 ntBASIC14.57□□□□□ -0.08
CMTM3Q96MX0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CMTM3Q96MX0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 AC006277.1-201ENST00000624348 1610 ntBASIC14.56□□□□□ -0.08
CMTM3Q96MX0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 FAM220CP-201ENST00000395253 831 ntBASIC14.56□□□□□ -0.08
CMTM3Q96MX0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 AC073912.3-201ENST00000624414 853 ntBASIC14.56□□□□□ -0.08
CMTM3Q96MX0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 AC125634.1-201ENST00000438758 1403 ntBASIC14.56□□□□□ -0.08
CMTM3Q96MX0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.56□□□□□ -0.08
CMTM3Q96MX0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMTM3Q96MX0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms