Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.61■□□□□ 0.73
CHAMP1Q96JM3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHAMP1Q96JM3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHAMP1Q96JM3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.61■□□□□ 0.73
CHAMP1Q96JM3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.61■□□□□ 0.73
CHAMP1Q96JM3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CHAMP1Q96JM3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHAMP1Q96JM3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CHAMP1Q96JM3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.61■□□□□ 0.73
CHAMP1Q96JM3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CHAMP1Q96JM3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHAMP1Q96JM3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.61■□□□□ 0.73
CHAMP1Q96JM3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 CHCHD2P8-201ENST00000429873 447 ntBASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 AC246785.2-201ENST00000432512 513 ntBASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 AC096582.2-201ENST00000510860 516 ntBASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 TPSP2-201ENST00000561760 610 ntBASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 AC097637.2-201ENST00000624096 1997 ntBASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
CHAMP1Q96JM3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 FAM86EP-206ENST00000510506 987 ntBASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 AC023824.1-201ENST00000562945 2975 ntBASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHAMP1Q96JM3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CHAMP1Q96JM3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHAMP1Q96JM3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.58■□□□□ 0.73
CHAMP1Q96JM3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHAMP1Q96JM3 SNX33P1-201ENST00000592116 1762 ntBASIC19.58■□□□□ 0.73
CHAMP1Q96JM3 NSUN5P1-202ENST00000421140 1535 ntBASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms