Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH3Q96II8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH3Q96II8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH3Q96II8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH3Q96II8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH3Q96II8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH3Q96II8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
LRCH3Q96II8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH3Q96II8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH3Q96II8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH3Q96II8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 AP3S2-216ENST00000617003 1561 ntBASIC18.18■□□□□ 0.5
LRCH3Q96II8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH3Q96II8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH3Q96II8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH3Q96II8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH3Q96II8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 DOC2GP-202ENST00000514950 1163 ntBASIC18.18■□□□□ 0.5
LRCH3Q96II8 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH3Q96II8 AC109635.5-201ENST00000533593 962 ntBASIC18.18■□□□□ 0.5
LRCH3Q96II8 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH3Q96II8 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 AL138918.1-201ENST00000568306 659 ntBASIC18.18■□□□□ 0.5
LRCH3Q96II8 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 MIR3615-201ENST00000581999 87 ntBASIC18.18■□□□□ 0.5
LRCH3Q96II8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH3Q96II8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 AC067852.2-201ENST00000590513 2313 ntBASIC18.18■□□□□ 0.5
LRCH3Q96II8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH3Q96II8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH3Q96II8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH3Q96II8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH3Q96II8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH3Q96II8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH3Q96II8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
LRCH3Q96II8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH3Q96II8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 FZD10-202ENST00000539839 3282 ntBASIC18.17■□□□□ 0.5
LRCH3Q96II8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH3Q96II8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH3Q96II8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH3Q96II8 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH3Q96II8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH3Q96II8 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH3Q96II8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 AC093004.1-201ENST00000508850 424 ntBASIC18.17■□□□□ 0.5
LRCH3Q96II8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH3Q96II8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH3Q96II8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH3Q96II8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH3Q96II8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH3Q96II8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LRCH3Q96II8 AC006538.1-201ENST00000567905 1585 ntBASIC18.17■□□□□ 0.5
LRCH3Q96II8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH3Q96II8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH3Q96II8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH3Q96II8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.16■□□□□ 0.5
LRCH3Q96II8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
LRCH3Q96II8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms