Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 AC099522.2-201ENST00000607001 744 ntBASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCD1Q96GM5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SMARCD1Q96GM5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.71■□□□□ 0.42
SMARCD1Q96GM5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.71■□□□□ 0.42
SMARCD1Q96GM5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SMARCD1Q96GM5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 AL161645.1-201ENST00000622716 1255 ntBASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 AC079781.4-201ENST00000641908 219 ntBASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCD1Q96GM5 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 AL391256.1-201ENST00000443260 1855 ntBASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 AL355306.1-201ENST00000415580 579 ntBASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 ADH5P3-201ENST00000433842 1137 ntBASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCD1Q96GM5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms