Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIPA1Q96FS4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SIPA1Q96FS4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SIPA1Q96FS4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.89■□□□□ 0.3
SIPA1Q96FS4 AL138688.1-201ENST00000624851 1594 ntBASIC16.89■□□□□ 0.3
SIPA1Q96FS4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.89■□□□□ 0.3
SIPA1Q96FS4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.89■□□□□ 0.3
SIPA1Q96FS4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.89■□□□□ 0.3
SIPA1Q96FS4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 SLC25A1P3-201ENST00000395415 828 ntBASIC16.89■□□□□ 0.29
SIPA1Q96FS4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 AC051619.7-201ENST00000568314 623 ntBASIC16.89■□□□□ 0.29
SIPA1Q96FS4 MIR3909-201ENST00000579518 119 ntBASIC16.89■□□□□ 0.29
SIPA1Q96FS4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 AC134043.2-201ENST00000624206 2238 ntBASIC16.89■□□□□ 0.29
SIPA1Q96FS4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIPA1Q96FS4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 KLF2P3-201ENST00000451977 1087 ntBASIC16.88■□□□□ 0.29
SIPA1Q96FS4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 AL390955.2-201ENST00000603032 514 ntBASIC16.88■□□□□ 0.29
SIPA1Q96FS4 AC008267.7-201ENST00000624570 1194 ntBASIC16.88■□□□□ 0.29
SIPA1Q96FS4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 AC116353.5-201ENST00000638148 1699 ntBASIC16.88■□□□□ 0.29
SIPA1Q96FS4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIPA1Q96FS4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIPA1Q96FS4 KRT8P49-201ENST00000604166 1432 ntBASIC16.87■□□□□ 0.29
SIPA1Q96FS4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SIPA1Q96FS4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.87■□□□□ 0.29
SIPA1Q96FS4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SIPA1Q96FS4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SIPA1Q96FS4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SIPA1Q96FS4 FRMD8P1-201ENST00000440433 1524 ntBASIC16.87■□□□□ 0.29
SIPA1Q96FS4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIPA1Q96FS4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIPA1Q96FS4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIPA1Q96FS4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIPA1Q96FS4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.87■□□□□ 0.29
SIPA1Q96FS4 MIR943-201ENST00000401286 94 ntBASIC16.87■□□□□ 0.29
SIPA1Q96FS4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.87■□□□□ 0.29
SIPA1Q96FS4 SPDYE7P-202ENST00000420373 878 ntBASIC16.87■□□□□ 0.29
SIPA1Q96FS4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.87■□□□□ 0.29
SIPA1Q96FS4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.87■□□□□ 0.29
SIPA1Q96FS4 AC125807.1-201ENST00000483097 614 ntBASIC16.87■□□□□ 0.29
SIPA1Q96FS4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.87■□□□□ 0.29
SIPA1Q96FS4 AC026150.2-201ENST00000564693 1156 ntBASIC16.87■□□□□ 0.29
SIPA1Q96FS4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SIPA1Q96FS4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms