Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 AC103702.1-201ENST00000548801 2630 ntBASIC16.11■□□□□ 0.17
LRRC58Q96CX6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 AK4P3-201ENST00000418260 669 ntBASIC16.11■□□□□ 0.17
LRRC58Q96CX6 ACTG1P4-201ENST00000425123 1122 ntBASIC16.11■□□□□ 0.17
LRRC58Q96CX6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 AC246785.2-201ENST00000432512 513 ntBASIC16.11■□□□□ 0.17
LRRC58Q96CX6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 AC092647.4-201ENST00000457211 535 ntBASIC16.11■□□□□ 0.17
LRRC58Q96CX6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC58Q96CX6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 AC006011.2-201ENST00000621313 1158 ntBASIC16.1■□□□□ 0.17
LRRC58Q96CX6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC58Q96CX6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC58Q96CX6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms