Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 MTND2P7-201ENST00000521337 640 ntBASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNIP1Q8TAD8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SNIP1Q8TAD8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 AC098614.1-201ENST00000368528 745 ntBASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 SPDYE12P-201ENST00000618416 771 ntBASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.89■□□□□ 0.13
SNIP1Q8TAD8 AC005332.8-201ENST00000622750 2735 ntBASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNIP1Q8TAD8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 AC138969.3-201ENST00000546612 1459 ntBASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 AC138932.2-201ENST00000548268 1459 ntBASIC15.87■□□□□ 0.13
SNIP1Q8TAD8 AC126755.4-201ENST00000549796 1459 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms