Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 RPS2P28-201ENST00000314255 741 ntBASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 AGGF1P2-201ENST00000426656 2106 ntBASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 FAM197Y8-203ENST00000450145 560 ntBASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 AC068587.6-202ENST00000641839 5619 ntBASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TTC9CQ8N5M4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 AC006504.4-201ENST00000592118 1568 ntBASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 AC004870.1-201ENST00000315132 882 ntBASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 AL450487.1-201ENST00000426799 995 ntBASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 RPS2P1-201ENST00000434010 821 ntBASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 FAAHP1-202ENST00000446499 1238 ntBASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 AF186996.4-201ENST00000467186 377 ntBASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 AL805961.1-202ENST00000641562 540 ntBASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TTC9CQ8N5M4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms