Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 RPS15P9-201ENST00000494093 319 ntBASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 AC136632.2-201ENST00000512891 861 ntBASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 AC105339.3-201ENST00000560043 636 ntBASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 MIR1199-201ENST00000621445 119 ntBASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 AL805961.1-202ENST00000641562 540 ntBASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 AF228730.7-201ENST00000641842 219 ntBASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC116Q8IYX3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 KRT8P49-201ENST00000604166 1432 ntBASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 AC087163.2-201ENST00000457299 853 ntBASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 AP002490.2-201ENST00000524791 560 ntBASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 AP002469.2-201ENST00000531724 424 ntBASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 AL160237.2-201ENST00000556165 472 ntBASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 AP002414.3-201ENST00000589352 1468 ntBASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 AL391256.1-201ENST00000443260 1855 ntBASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.94■□□□□ 0.14
CCDC116Q8IYX3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 UBALD1-205ENST00000590891 2641 ntBASIC15.93■□□□□ 0.14
CCDC116Q8IYX3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms