Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 SLC25A6P2-201ENST00000497974 877 ntBASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 AL513190.1-201ENST00000621254 727 ntBASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 AC092865.6-201ENST00000642101 219 ntBASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 GPX1P2-201ENST00000429271 606 ntBASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM48Q8IWZ4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM48Q8IWZ4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM48Q8IWZ4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM48Q8IWZ4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
TRIM48Q8IWZ4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM48Q8IWZ4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.58■□□□□ 0.25
TRIM48Q8IWZ4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM48Q8IWZ4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM48Q8IWZ4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.58■□□□□ 0.25
TRIM48Q8IWZ4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM48Q8IWZ4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM48Q8IWZ4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM48Q8IWZ4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM48Q8IWZ4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM48Q8IWZ4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM48Q8IWZ4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 FAM185BP-201ENST00000443595 716 ntBASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 KRT19P2-202ENST00000557173 1012 ntBASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 AC025580.3-201ENST00000617932 1424 ntBASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms