Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 KRT18P32-201ENST00000424695 1287 ntBASIC17.94■□□□□ 0.46
RNF135Q8IUD6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 AC125807.1-201ENST00000483097 614 ntBASIC17.94■□□□□ 0.46
RNF135Q8IUD6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 AL390754.1-201ENST00000619088 582 ntBASIC17.94■□□□□ 0.46
RNF135Q8IUD6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 TREML5P-201ENST00000421694 576 ntBASIC17.93■□□□□ 0.46
RNF135Q8IUD6 FAM58DP-201ENST00000428076 619 ntBASIC17.93■□□□□ 0.46
RNF135Q8IUD6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 IGHV3-42-201ENST00000520410 361 ntBASIC17.93■□□□□ 0.46
RNF135Q8IUD6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 OR6D1P-203ENST00000641209 4860 ntBASIC17.93■□□□□ 0.46
RNF135Q8IUD6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF135Q8IUD6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 LINC00982-205ENST00000420957 435 ntBASIC17.92■□□□□ 0.46
RNF135Q8IUD6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 AL512638.1-201ENST00000457493 794 ntBASIC17.92■□□□□ 0.46
RNF135Q8IUD6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 AC140878.1-201ENST00000565277 250 ntBASIC17.92■□□□□ 0.46
RNF135Q8IUD6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 REXO1L11P-201ENST00000620964 1927 ntBASIC17.92■□□□□ 0.46
RNF135Q8IUD6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF135Q8IUD6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF135Q8IUD6 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms