Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AKAP8P1-201ENST00000434743 1349 ntBASIC18.78■□□□□ 0.6
TRIM50Q86XT4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 MIR770-201ENST00000390219 98 ntBASIC18.78■□□□□ 0.6
TRIM50Q86XT4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 AC087641.1-201ENST00000557561 1021 ntBASIC18.78■□□□□ 0.6
TRIM50Q86XT4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 AL161645.1-201ENST00000622716 1255 ntBASIC18.78■□□□□ 0.6
TRIM50Q86XT4 Z92544.3-201ENST00000624747 417 ntBASIC18.78■□□□□ 0.6
TRIM50Q86XT4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 LTB4R2-202ENST00000528054 3092 ntBASIC18.78■□□□□ 0.6
TRIM50Q86XT4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRIM50Q86XT4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 AC106820.2-201ENST00000563775 3264 ntBASIC18.77■□□□□ 0.6
TRIM50Q86XT4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 KRT8P49-201ENST00000604166 1432 ntBASIC18.77■□□□□ 0.6
TRIM50Q86XT4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 AC092474.2-201ENST00000424288 719 ntBASIC18.77■□□□□ 0.6
TRIM50Q86XT4 GPS2P2-201ENST00000430745 888 ntBASIC18.77■□□□□ 0.6
TRIM50Q86XT4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 AC025678.2-201ENST00000562061 970 ntBASIC18.77■□□□□ 0.6
TRIM50Q86XT4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM50Q86XT4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM50Q86XT4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
TRIM50Q86XT4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM50Q86XT4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TRIM50Q86XT4 LINC02012-201ENST00000608206 1725 ntBASIC18.77■□□□□ 0.59
TRIM50Q86XT4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.77■□□□□ 0.59
TRIM50Q86XT4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.76■□□□□ 0.59
TRIM50Q86XT4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.76■□□□□ 0.59
TRIM50Q86XT4 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.76■□□□□ 0.59
TRIM50Q86XT4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms