Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 ATP5G2P1-201ENST00000433580 426 ntBASIC17.28■□□□□ 0.36
CASC4Q6P4E1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 AC004817.3-201ENST00000602957 2129 ntBASIC17.28■□□□□ 0.36
CASC4Q6P4E1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 AP002490.2-201ENST00000524791 560 ntBASIC17.27■□□□□ 0.36
CASC4Q6P4E1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 AL445228.2-201ENST00000605589 952 ntBASIC17.27■□□□□ 0.36
CASC4Q6P4E1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASC4Q6P4E1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CASC4Q6P4E1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CASC4Q6P4E1 SIGLEC16-201ENST00000599858 1437 ntBASIC17.27■□□□□ 0.35
CASC4Q6P4E1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CASC4Q6P4E1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.27■□□□□ 0.35
CASC4Q6P4E1 AL662844.4-201ENST00000606367 2838 ntBASIC17.27■□□□□ 0.35
CASC4Q6P4E1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CASC4Q6P4E1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CASC4Q6P4E1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CASC4Q6P4E1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.27■□□□□ 0.35
CASC4Q6P4E1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.27■□□□□ 0.35
CASC4Q6P4E1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.27■□□□□ 0.35
CASC4Q6P4E1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CASC4Q6P4E1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.27■□□□□ 0.35
CASC4Q6P4E1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 LINC00982-205ENST00000420957 435 ntBASIC17.26■□□□□ 0.35
CASC4Q6P4E1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms