Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 AC079140.1-201ENST00000508039 487 ntBASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 AKAP8P1-201ENST00000434743 1349 ntBASIC18.74■□□□□ 0.59
SWSAP1Q6NVH7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 AC006277.1-201ENST00000624348 1610 ntBASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
SWSAP1Q6NVH7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SWSAP1Q6NVH7 AP001094.4-201ENST00000579008 2176 ntBASIC18.72■□□□□ 0.59
SWSAP1Q6NVH7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SWSAP1Q6NVH7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SWSAP1Q6NVH7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.72■□□□□ 0.59
SWSAP1Q6NVH7 AL671710.1-201ENST00000610245 2349 ntBASIC18.72■□□□□ 0.59
SWSAP1Q6NVH7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.72■□□□□ 0.59
SWSAP1Q6NVH7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SWSAP1Q6NVH7 PKD1P1-201ENST00000458669 6805 ntBASIC18.72■□□□□ 0.59
SWSAP1Q6NVH7 AL139400.1-201ENST00000366220 510 ntBASIC18.72■□□□□ 0.59
SWSAP1Q6NVH7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SWSAP1Q6NVH7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
SWSAP1Q6NVH7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SWSAP1Q6NVH7 AL592309.1-201ENST00000443127 649 ntBASIC18.72■□□□□ 0.59
SWSAP1Q6NVH7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.72■□□□□ 0.59
SWSAP1Q6NVH7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms