Protein–RNA interactions for Protein: Q6IQ49

SDE2, Protein SDE2 homolog, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2Q6IQ49 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 SPCS2P1-201ENST00000561636 679 ntBASIC17.11■□□□□ 0.33
SDE2Q6IQ49 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 AC091167.2-201ENST00000579581 588 ntBASIC17.11■□□□□ 0.33
SDE2Q6IQ49 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.11■□□□□ 0.33
SDE2Q6IQ49 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 TOP3BP1-201ENST00000420768 1380 ntBASIC17.11■□□□□ 0.33
SDE2Q6IQ49 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
SDE2Q6IQ49 UXT-AS1-201ENST00000590504 1525 ntBASIC17.11■□□□□ 0.33
SDE2Q6IQ49 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 AC092474.2-201ENST00000424288 719 ntBASIC17.1■□□□□ 0.33
SDE2Q6IQ49 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.1■□□□□ 0.33
SDE2Q6IQ49 RNA5SP421-201ENST00000516864 134 ntBASIC17.1■□□□□ 0.33
SDE2Q6IQ49 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 KRT8P23-201ENST00000560090 1207 ntBASIC17.1■□□□□ 0.33
SDE2Q6IQ49 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 AL096865.1-201ENST00000606796 927 ntBASIC17.1■□□□□ 0.33
SDE2Q6IQ49 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 AL021920.2-201ENST00000624828 1351 ntBASIC17.1■□□□□ 0.33
SDE2Q6IQ49 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.1■□□□□ 0.33
SDE2Q6IQ49 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 PMS2P4-201ENST00000412466 1052 ntBASIC17.09■□□□□ 0.33
SDE2Q6IQ49 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 AC109635.5-201ENST00000533593 962 ntBASIC17.09■□□□□ 0.33
SDE2Q6IQ49 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 AC087641.1-201ENST00000557561 1021 ntBASIC17.09■□□□□ 0.33
SDE2Q6IQ49 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 Z92544.3-201ENST00000624747 417 ntBASIC17.09■□□□□ 0.33
SDE2Q6IQ49 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.09■□□□□ 0.33
SDE2Q6IQ49 AC093525.9-201ENST00000624961 1746 ntBASIC17.09■□□□□ 0.33
SDE2Q6IQ49 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms