Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 MIR4492-201ENST00000581627 80 ntBASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 AC008738.7-201ENST00000609744 511 ntBASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 ARSEP1-201ENST00000420443 635 ntBASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 AL353779.1-201ENST00000434793 351 ntBASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 AC009407.1-201ENST00000568958 598 ntBASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LYSMD4Q5XG99 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 AC138969.3-201ENST00000546612 1459 ntBASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 AC138932.2-201ENST00000548268 1459 ntBASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 AC126755.4-201ENST00000549796 1459 ntBASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 AC098614.1-201ENST00000368528 745 ntBASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 FAM220BP-201ENST00000377689 816 ntBASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 RN7SL828P-201ENST00000607615 303 ntBASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 AL844908.2-201ENST00000609461 460 ntBASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 SPTSSB-204ENST00000617024 1292 ntBASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 FRMD8P1-201ENST00000440433 1524 ntBASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 FOXO1B-201ENST00000504678 1527 ntBASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LYSMD4Q5XG99 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms