Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 AL512361.1-201ENST00000554200 418 ntBASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC11.17□□□□□ -0.62
VPS13DQ5THJ4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 AC092337.1-201ENST00000568699 1129 ntBASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 TMEM261P1-201ENST00000604899 340 ntBASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 AP001350.2-201ENST00000625104 1094 ntBASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 PP12613-201ENST00000424958 2230 ntBASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 AC004945.1-201ENST00000416738 983 ntBASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 MFF-223ENST00000524634 647 ntTSL 2 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13DQ5THJ4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
VPS13DQ5THJ4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13DQ5THJ4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC11.15□□□□□ -0.62
VPS13DQ5THJ4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
VPS13DQ5THJ4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13DQ5THJ4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC11.15□□□□□ -0.62
VPS13DQ5THJ4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13DQ5THJ4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.15□□□□□ -0.62
VPS13DQ5THJ4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13DQ5THJ4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.15□□□□□ -0.62
VPS13DQ5THJ4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
VPS13DQ5THJ4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC11.15□□□□□ -0.62
VPS13DQ5THJ4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC11.15□□□□□ -0.62
VPS13DQ5THJ4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13DQ5THJ4 AC114501.2-201ENST00000439631 535 ntBASIC11.15□□□□□ -0.62
VPS13DQ5THJ4 INE1-201ENST00000456273 945 ntBASIC11.15□□□□□ -0.62
VPS13DQ5THJ4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC11.15□□□□□ -0.62
VPS13DQ5THJ4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms