Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 REXO1L9P-201ENST00000604264 2108 ntBASIC14.45□□□□□ -0.1
LRRK2Q5S007 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.45□□□□□ -0.1
LRRK2Q5S007 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 PFN1P12-201ENST00000455938 534 ntBASIC14.45□□□□□ -0.1
LRRK2Q5S007 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 AL022328.3-201ENST00000607943 679 ntBASIC14.45□□□□□ -0.1
LRRK2Q5S007 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRK2Q5S007 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 AC098859.1-201ENST00000502915 1238 ntBASIC14.45□□□□□ -0.1
LRRK2Q5S007 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.45□□□□□ -0.1
LRRK2Q5S007 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRK2Q5S007 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.44□□□□□ -0.1
LRRK2Q5S007 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRK2Q5S007 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRK2Q5S007 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRK2Q5S007 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRK2Q5S007 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.44□□□□□ -0.1
LRRK2Q5S007 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.44□□□□□ -0.1
LRRK2Q5S007 ACTG1P17-201ENST00000558391 1119 ntBASIC14.44□□□□□ -0.1
LRRK2Q5S007 MIR3619-201ENST00000579667 83 ntBASIC14.44□□□□□ -0.1
LRRK2Q5S007 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LRRK2Q5S007 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRK2Q5S007 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LRRK2Q5S007 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRK2Q5S007 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRK2Q5S007 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRK2Q5S007 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRK2Q5S007 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRK2Q5S007 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRK2Q5S007 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRK2Q5S007 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRK2Q5S007 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.44□□□□□ -0.1
LRRK2Q5S007 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRK2Q5S007 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRK2Q5S007 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.44□□□□□ -0.1
LRRK2Q5S007 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRK2Q5S007 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRK2Q5S007 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRK2Q5S007 AL589987.1-201ENST00000453380 819 ntBASIC14.44□□□□□ -0.1
LRRK2Q5S007 AP001258.2-201ENST00000529891 490 ntBASIC14.44□□□□□ -0.1
LRRK2Q5S007 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRK2Q5S007 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.44□□□□□ -0.1
LRRK2Q5S007 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRK2Q5S007 AL031598.1-201ENST00000561511 1773 ntBASIC14.44□□□□□ -0.1
LRRK2Q5S007 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRK2Q5S007 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.43□□□□□ -0.1
LRRK2Q5S007 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRK2Q5S007 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.43□□□□□ -0.1
LRRK2Q5S007 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRK2Q5S007 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRK2Q5S007 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRK2Q5S007 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LRRK2Q5S007 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRK2Q5S007 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.43□□□□□ -0.1
LRRK2Q5S007 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.43□□□□□ -0.1
LRRK2Q5S007 RN7SL769P-201ENST00000469386 295 ntBASIC14.43□□□□□ -0.1
LRRK2Q5S007 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRK2Q5S007 HNRNPUP1-201ENST00000554987 333 ntBASIC14.43□□□□□ -0.1
LRRK2Q5S007 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.43□□□□□ -0.1
LRRK2Q5S007 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRK2Q5S007 MIR5189-201ENST00000577370 114 ntBASIC14.43□□□□□ -0.1
LRRK2Q5S007 AC091271.1-201ENST00000611877 1162 ntBASIC14.43□□□□□ -0.1
LRRK2Q5S007 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRK2Q5S007 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
LRRK2Q5S007 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRK2Q5S007 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRK2Q5S007 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRK2Q5S007 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRK2Q5S007 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms