Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-BQ31612 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-BQ31612 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-BQ31612 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.27■□□□□ 0.19
HLA-BQ31612 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
HLA-BQ31612 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-BQ31612 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-BQ31612 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-BQ31612 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-BQ31612 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-BQ31612 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HLA-BQ31612 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-BQ31612 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HLA-BQ31612 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-BQ31612 CETN4P-206ENST00000642099 2168 ntBASIC16.26■□□□□ 0.19
HLA-BQ31612 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-BQ31612 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-BQ31612 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HLA-BQ31612 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HLA-BQ31612 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-BQ31612 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-BQ31612 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-BQ31612 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-BQ31612 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-BQ31612 AL589739.1-201ENST00000607720 493 ntBASIC16.26■□□□□ 0.19
HLA-BQ31612 AC008738.7-201ENST00000609744 511 ntBASIC16.26■□□□□ 0.19
HLA-BQ31612 TEX28P1-201ENST00000613479 1221 ntBASIC16.26■□□□□ 0.19
HLA-BQ31612 SPTSSB-204ENST00000617024 1292 ntBASIC16.26■□□□□ 0.19
HLA-BQ31612 TEX28P2-201ENST00000617764 1221 ntBASIC16.26■□□□□ 0.19
HLA-BQ31612 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-BQ31612 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-BQ31612 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-BQ31612 AC007541.1-201ENST00000570282 1469 ntBASIC16.26■□□□□ 0.19
HLA-BQ31612 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-BQ31612 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-BQ31612 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-BQ31612 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
HLA-BQ31612 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-BQ31612 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-BQ31612 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-BQ31612 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-BQ31612 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-BQ31612 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HLA-BQ31612 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HLA-BQ31612 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
HLA-BQ31612 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 RPL37AP1-201ENST00000412502 279 ntBASIC16.25■□□□□ 0.19
HLA-BQ31612 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.25■□□□□ 0.19
HLA-BQ31612 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.25■□□□□ 0.19
HLA-BQ31612 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-BQ31612 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-BQ31612 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.25■□□□□ 0.19
HLA-BQ31612 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.25■□□□□ 0.19
HLA-BQ31612 TP53TG3HP-202ENST00000569755 579 ntBASIC16.25■□□□□ 0.19
HLA-BQ31612 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.25■□□□□ 0.19
HLA-BQ31612 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-BQ31612 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-BQ31612 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-BQ31612 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-BQ31612 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-BQ31612 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.25■□□□□ 0.19
HLA-BQ31612 MIR6752-201ENST00000618442 71 ntBASIC16.25■□□□□ 0.19
HLA-BQ31612 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-BQ31612 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms