Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 HLA-H-201ENST00000383620 1096 ntBASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 AC108725.1-201ENST00000495472 409 ntBASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 SPDYE18-201ENST00000510091 1050 ntBASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 AC123567.1-201ENST00000548294 1261 ntBASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO4Q2I0M5 AL353732.1-201ENST00000569618 1459 ntBASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 AC006538.1-201ENST00000567905 1585 ntBASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 RN7SL618P-201ENST00000477850 296 ntBASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 AC015936.2-201ENST00000593177 259 ntBASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO4Q2I0M5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms