Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.38□□□□□ -0.11
EFNB3Q15768 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 AC099522.2-201ENST00000607001 744 ntBASIC14.38□□□□□ -0.11
EFNB3Q15768 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.38□□□□□ -0.11
EFNB3Q15768 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
EFNB3Q15768 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.38□□□□□ -0.11
EFNB3Q15768 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.38□□□□□ -0.11
EFNB3Q15768 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.38□□□□□ -0.11
EFNB3Q15768 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 TUBB8P12-201ENST00000308911 1335 ntBASIC14.38□□□□□ -0.11
EFNB3Q15768 TUBB7P-202ENST00000428444 1305 ntBASIC14.38□□□□□ -0.11
EFNB3Q15768 TUBB8P7-204ENST00000567960 1332 ntBASIC14.38□□□□□ -0.11
EFNB3Q15768 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
EFNB3Q15768 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNB3Q15768 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
EFNB3Q15768 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNB3Q15768 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
EFNB3Q15768 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.37□□□□□ -0.11
EFNB3Q15768 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.37□□□□□ -0.11
EFNB3Q15768 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNB3Q15768 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNB3Q15768 SLC22A20-204ENST00000530038 1673 ntBASIC14.37□□□□□ -0.11
EFNB3Q15768 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNB3Q15768 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
EFNB3Q15768 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
EFNB3Q15768 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNB3Q15768 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNB3Q15768 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.37□□□□□ -0.11
EFNB3Q15768 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.37□□□□□ -0.11
EFNB3Q15768 AL671277.1-201ENST00000429656 993 ntBASIC14.37□□□□□ -0.11
EFNB3Q15768 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.37□□□□□ -0.11
EFNB3Q15768 RN7SL589P-201ENST00000481268 310 ntBASIC14.37□□□□□ -0.11
EFNB3Q15768 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.37□□□□□ -0.11
EFNB3Q15768 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.37□□□□□ -0.11
EFNB3Q15768 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.37□□□□□ -0.11
EFNB3Q15768 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.37□□□□□ -0.11
EFNB3Q15768 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNB3Q15768 AC026120.1-201ENST00000611536 926 ntBASIC14.37□□□□□ -0.11
EFNB3Q15768 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.37□□□□□ -0.11
EFNB3Q15768 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.37□□□□□ -0.11
EFNB3Q15768 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNB3Q15768 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
EFNB3Q15768 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.37□□□□□ -0.11
EFNB3Q15768 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.37□□□□□ -0.11
EFNB3Q15768 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EFNB3Q15768 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNB3Q15768 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNB3Q15768 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.37□□□□□ -0.11
EFNB3Q15768 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.37□□□□□ -0.11
EFNB3Q15768 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
EFNB3Q15768 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.37□□□□□ -0.11
EFNB3Q15768 AKAP8P1-201ENST00000434743 1349 ntBASIC14.37□□□□□ -0.11
EFNB3Q15768 KRT18P28-201ENST00000453838 1332 ntBASIC14.37□□□□□ -0.11
EFNB3Q15768 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
EFNB3Q15768 PP12613-201ENST00000424958 2230 ntBASIC14.37□□□□□ -0.11
EFNB3Q15768 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNB3Q15768 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
EFNB3Q15768 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNB3Q15768 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
EFNB3Q15768 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNB3Q15768 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
EFNB3Q15768 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
EFNB3Q15768 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.36□□□□□ -0.11
EFNB3Q15768 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 AC131009.4-201ENST00000624048 1740 ntBASIC14.36□□□□□ -0.11
EFNB3Q15768 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNB3Q15768 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
EFNB3Q15768 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
EFNB3Q15768 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 RNU1-129P-201ENST00000384064 167 ntBASIC14.36□□□□□ -0.11
EFNB3Q15768 PMS2P4-201ENST00000412466 1052 ntBASIC14.36□□□□□ -0.11
EFNB3Q15768 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.36□□□□□ -0.11
EFNB3Q15768 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EFNB3Q15768 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
EFNB3Q15768 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.36□□□□□ -0.11
EFNB3Q15768 RARRES2P8-201ENST00000566335 367 ntBASIC14.36□□□□□ -0.11
EFNB3Q15768 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.36□□□□□ -0.11
EFNB3Q15768 U1.21-201ENST00000580816 167 ntBASIC14.36□□□□□ -0.11
EFNB3Q15768 AC022145.2-201ENST00000598203 171 ntBASIC14.36□□□□□ -0.11
EFNB3Q15768 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms