Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DRB3P79483 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-DRB3P79483 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DRB3P79483 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DRB3P79483 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DRB3P79483 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DRB3P79483 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DRB3P79483 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DRB3P79483 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DRB3P79483 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 LINC00554-201ENST00000564841 3011 ntBASIC14.19□□□□□ -0.14
HLA-DRB3P79483 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 AL645728.1-201ENST00000366221 2101 ntBASIC14.19□□□□□ -0.14
HLA-DRB3P79483 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 IGHV3-47-201ENST00000425060 335 ntBASIC14.19□□□□□ -0.14
HLA-DRB3P79483 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 AC006449.5-201ENST00000610658 2098 ntBASIC14.19□□□□□ -0.14
HLA-DRB3P79483 IER3-202ENST00000376377 1350 ntBASIC14.19□□□□□ -0.14
HLA-DRB3P79483 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DRB3P79483 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 AC097637.2-201ENST00000624096 1997 ntBASIC14.18□□□□□ -0.14
HLA-DRB3P79483 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 SIGLEC16-201ENST00000599858 1437 ntBASIC14.18□□□□□ -0.14
HLA-DRB3P79483 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 POM121L3P-201ENST00000419331 1163 ntBASIC14.18□□□□□ -0.14
HLA-DRB3P79483 PCED1CP-201ENST00000419887 785 ntBASIC14.18□□□□□ -0.14
HLA-DRB3P79483 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 AC104819.1-201ENST00000504587 486 ntBASIC14.18□□□□□ -0.14
HLA-DRB3P79483 KRT18P21-201ENST00000515767 1272 ntBASIC14.18□□□□□ -0.14
HLA-DRB3P79483 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 AL021920.2-201ENST00000624828 1351 ntBASIC14.18□□□□□ -0.14
HLA-DRB3P79483 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB3P79483 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms