Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST1H3AP68431 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.77□□□□□ -0.04
HIST1H3AP68431 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.77□□□□□ -0.04
HIST1H3AP68431 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST1H3AP68431 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HIST1H3AP68431 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST1H3AP68431 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST1H3AP68431 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST1H3AP68431 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST1H3AP68431 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.77□□□□□ -0.04
HIST1H3AP68431 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.77□□□□□ -0.04
HIST1H3AP68431 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST1H3AP68431 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HIST1H3AP68431 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST1H3AP68431 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
HIST1H3AP68431 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H3AP68431 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.77□□□□□ -0.05
HIST1H3AP68431 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H3AP68431 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H3AP68431 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.77□□□□□ -0.05
HIST1H3AP68431 FAAHP1-202ENST00000446499 1238 ntBASIC14.77□□□□□ -0.05
HIST1H3AP68431 AF186996.4-201ENST00000467186 377 ntBASIC14.77□□□□□ -0.05
HIST1H3AP68431 AC107918.2-201ENST00000530817 355 ntBASIC14.77□□□□□ -0.05
HIST1H3AP68431 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.77□□□□□ -0.05
HIST1H3AP68431 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.77□□□□□ -0.05
HIST1H3AP68431 AC105339.3-201ENST00000560043 636 ntBASIC14.77□□□□□ -0.05
HIST1H3AP68431 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
HIST1H3AP68431 RN7SL510P-201ENST00000581311 263 ntBASIC14.77□□□□□ -0.05
HIST1H3AP68431 MPDU1-223ENST00000582151 728 ntBASIC14.77□□□□□ -0.05
HIST1H3AP68431 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.77□□□□□ -0.05
HIST1H3AP68431 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H3AP68431 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
HIST1H3AP68431 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.77□□□□□ -0.05
HIST1H3AP68431 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.77□□□□□ -0.05
HIST1H3AP68431 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H3AP68431 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
HIST1H3AP68431 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H3AP68431 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HIST1H3AP68431 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.77□□□□□ -0.05
HIST1H3AP68431 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
HIST1H3AP68431 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.77□□□□□ -0.05
HIST1H3AP68431 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.77□□□□□ -0.05
HIST1H3AP68431 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
HIST1H3AP68431 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HIST1H3AP68431 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H3AP68431 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.76□□□□□ -0.05
HIST1H3AP68431 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H3AP68431 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H3AP68431 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
HIST1H3AP68431 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H3AP68431 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H3AP68431 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.76□□□□□ -0.05
HIST1H3AP68431 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
HIST1H3AP68431 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H3AP68431 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.76□□□□□ -0.05
HIST1H3AP68431 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.76□□□□□ -0.05
HIST1H3AP68431 SNX33P1-201ENST00000592116 1762 ntBASIC14.76□□□□□ -0.05
HIST1H3AP68431 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H3AP68431 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H3AP68431 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.76□□□□□ -0.05
HIST1H3AP68431 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
HIST1H3AP68431 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.76□□□□□ -0.05
HIST1H3AP68431 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H3AP68431 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
HIST1H3AP68431 AL450487.1-201ENST00000426799 995 ntBASIC14.76□□□□□ -0.05
HIST1H3AP68431 AC079781.3-201ENST00000449110 356 ntBASIC14.76□□□□□ -0.05
HIST1H3AP68431 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.76□□□□□ -0.05
HIST1H3AP68431 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.76□□□□□ -0.05
HIST1H3AP68431 IGHV3-65-201ENST00000523210 341 ntBASIC14.76□□□□□ -0.05
HIST1H3AP68431 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.76□□□□□ -0.05
HIST1H3AP68431 AC012640.2-201ENST00000561606 901 ntBASIC14.76□□□□□ -0.05
HIST1H3AP68431 AL356488.2-201ENST00000602755 427 ntBASIC14.76□□□□□ -0.05
HIST1H3AP68431 AC104692.2-201ENST00000603054 253 ntBASIC14.76□□□□□ -0.05
HIST1H3AP68431 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H3AP68431 PGM5P2-202ENST00000637225 1043 ntBASIC14.76□□□□□ -0.05
HIST1H3AP68431 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H3AP68431 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.76□□□□□ -0.05
HIST1H3AP68431 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.76□□□□□ -0.05
HIST1H3AP68431 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HIST1H3AP68431 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
HIST1H3AP68431 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H3AP68431 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H3AP68431 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H3AP68431 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H3AP68431 AC004870.1-201ENST00000315132 882 ntBASIC14.75□□□□□ -0.05
HIST1H3AP68431 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H3AP68431 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms