Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPCS3P61009 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.82□□□□□ -0.2
SPCS3P61009 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SPCS3P61009 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 KRT8P10-201ENST00000450021 1447 ntBASIC13.81□□□□□ -0.2
SPCS3P61009 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.81□□□□□ -0.2
SPCS3P61009 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SPCS3P61009 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
SPCS3P61009 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SPCS3P61009 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.81□□□□□ -0.2
SPCS3P61009 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
SPCS3P61009 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 FRMD8P1-201ENST00000440433 1524 ntBASIC13.81□□□□□ -0.2
SPCS3P61009 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SPCS3P61009 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SPCS3P61009 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SPCS3P61009 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SPCS3P61009 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 CYP2T1P-202ENST00000641596 2535 ntBASIC13.81□□□□□ -0.2
SPCS3P61009 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 TERF1P1-201ENST00000311003 1181 ntBASIC13.81□□□□□ -0.2
SPCS3P61009 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.81□□□□□ -0.2
SPCS3P61009 AL596275.1-201ENST00000423464 877 ntBASIC13.81□□□□□ -0.2
SPCS3P61009 KRT18P38-201ENST00000449496 1282 ntBASIC13.81□□□□□ -0.2
SPCS3P61009 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.81□□□□□ -0.2
SPCS3P61009 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.81□□□□□ -0.2
SPCS3P61009 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.81□□□□□ -0.2
SPCS3P61009 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.81□□□□□ -0.2
SPCS3P61009 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.81□□□□□ -0.2
SPCS3P61009 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.81□□□□□ -0.2
SPCS3P61009 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.81□□□□□ -0.2
SPCS3P61009 AL138831.2-201ENST00000606564 490 ntBASIC13.81□□□□□ -0.2
SPCS3P61009 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SPCS3P61009 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.81□□□□□ -0.2
SPCS3P61009 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
SPCS3P61009 AL135999.2-201ENST00000622438 1686 ntBASIC13.81□□□□□ -0.2
SPCS3P61009 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.81□□□□□ -0.2
SPCS3P61009 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.81□□□□□ -0.2
SPCS3P61009 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
SPCS3P61009 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.81□□□□□ -0.2
SPCS3P61009 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPCS3P61009 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.8□□□□□ -0.2
SPCS3P61009 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SPCS3P61009 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.8□□□□□ -0.2
SPCS3P61009 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 AC009336.1-201ENST00000608941 1553 ntBASIC13.8□□□□□ -0.2
SPCS3P61009 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SPCS3P61009 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
SPCS3P61009 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SPCS3P61009 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
SPCS3P61009 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SPCS3P61009 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
SPCS3P61009 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.8□□□□□ -0.2
SPCS3P61009 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.8□□□□□ -0.2
SPCS3P61009 STK19B-204ENST00000512515 211 ntBASIC13.8□□□□□ -0.2
SPCS3P61009 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.8□□□□□ -0.2
SPCS3P61009 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.8□□□□□ -0.2
SPCS3P61009 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.8□□□□□ -0.2
SPCS3P61009 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.8□□□□□ -0.2
SPCS3P61009 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.8□□□□□ -0.2
SPCS3P61009 AL353801.3-201ENST00000609898 542 ntBASIC13.8□□□□□ -0.2
SPCS3P61009 HYMAI.1-201ENST00000620949 238 ntBASIC13.8□□□□□ -0.2
SPCS3P61009 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPCS3P61009 TUBB8P12-201ENST00000308911 1335 ntBASIC13.8□□□□□ -0.2
SPCS3P61009 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms