Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AL928711.1-201ENST00000570165 459 ntBASIC18.58■□□□□ 0.56
PEX3P56589 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.58■□□□□ 0.56
PEX3P56589 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.58■□□□□ 0.56
PEX3P56589 AL645728.2-201ENST00000641974 660 ntBASIC18.58■□□□□ 0.56
PEX3P56589 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PEX3P56589 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PEX3P56589 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PEX3P56589 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PEX3P56589 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PEX3P56589 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PEX3P56589 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.57■□□□□ 0.56
PEX3P56589 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
PEX3P56589 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PEX3P56589 AC006277.1-201ENST00000624348 1610 ntBASIC18.57■□□□□ 0.56
PEX3P56589 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.57■□□□□ 0.56
PEX3P56589 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.57■□□□□ 0.56
PEX3P56589 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.57■□□□□ 0.56
PEX3P56589 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PEX3P56589 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.57■□□□□ 0.56
PEX3P56589 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 YBX2P1-201ENST00000394192 760 ntBASIC18.57■□□□□ 0.56
PEX3P56589 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.57■□□□□ 0.56
PEX3P56589 AC074386.1-202ENST00000463561 864 ntBASIC18.57■□□□□ 0.56
PEX3P56589 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 AC087641.1-201ENST00000557561 1021 ntBASIC18.57■□□□□ 0.56
PEX3P56589 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.57■□□□□ 0.56
PEX3P56589 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.57■□□□□ 0.56
PEX3P56589 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
PEX3P56589 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PEX3P56589 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PEX3P56589 RNF216P1-203ENST00000404404 2427 ntBASIC18.57■□□□□ 0.56
PEX3P56589 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PEX3P56589 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
PEX3P56589 AL391256.1-201ENST00000443260 1855 ntBASIC18.56■□□□□ 0.56
PEX3P56589 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PEX3P56589 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PEX3P56589 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.56■□□□□ 0.56
PEX3P56589 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.56■□□□□ 0.56
PEX3P56589 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PEX3P56589 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
PEX3P56589 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PEX3P56589 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PEX3P56589 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.56■□□□□ 0.56
PEX3P56589 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.56■□□□□ 0.56
PEX3P56589 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PEX3P56589 BX842568.4-201ENST00000421222 227 ntBASIC18.56■□□□□ 0.56
PEX3P56589 AC092865.5-201ENST00000545435 363 ntBASIC18.56■□□□□ 0.56
PEX3P56589 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.56■□□□□ 0.56
PEX3P56589 CYP2A7P1-201ENST00000595391 815 ntBASIC18.56■□□□□ 0.56
PEX3P56589 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PEX3P56589 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PEX3P56589 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PEX3P56589 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PEX3P56589 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PEX3P56589 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.56■□□□□ 0.56
PEX3P56589 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PEX3P56589 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PEX3P56589 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PEX3P56589 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PEX3P56589 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PEX3P56589 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PEX3P56589 AC092919.2-201ENST00000623631 1645 ntBASIC18.56■□□□□ 0.56
PEX3P56589 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PEX3P56589 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PEX3P56589 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PEX3P56589 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PEX3P56589 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.55■□□□□ 0.56
PEX3P56589 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PEX3P56589 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.55■□□□□ 0.56
PEX3P56589 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PEX3P56589 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.55■□□□□ 0.56
PEX3P56589 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.55■□□□□ 0.56
PEX3P56589 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.55■□□□□ 0.56
PEX3P56589 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PEX3P56589 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PEX3P56589 AC106886.4-201ENST00000623557 2502 ntBASIC18.55■□□□□ 0.56
PEX3P56589 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PEX3P56589 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.55■□□□□ 0.56
PEX3P56589 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PEX3P56589 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PEX3P56589 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
PEX3P56589 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms