Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
CDH11P55287 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH11P55287 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH11P55287 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CDH11P55287 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH11P55287 BNIP3P18-201ENST00000593976 575 ntBASIC15.54■□□□□ 0.08
CDH11P55287 AC019129.2-201ENST00000609837 1235 ntBASIC15.54■□□□□ 0.08
CDH11P55287 AC114341.1-201ENST00000618070 349 ntBASIC15.54■□□□□ 0.08
CDH11P55287 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH11P55287 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH11P55287 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH11P55287 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH11P55287 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH11P55287 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH11P55287 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH11P55287 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH11P55287 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CDH11P55287 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH11P55287 AC009078.2-202ENST00000463353 338 ntBASIC15.53■□□□□ 0.08
CDH11P55287 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CDH11P55287 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH11P55287 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH11P55287 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH11P55287 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH11P55287 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH11P55287 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CDH11P55287 AL591684.3-201ENST00000605187 298 ntBASIC15.53■□□□□ 0.08
CDH11P55287 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH11P55287 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
CDH11P55287 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH11P55287 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH11P55287 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH11P55287 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH11P55287 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH11P55287 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH11P55287 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH11P55287 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH11P55287 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH11P55287 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH11P55287 CYP2T1P-202ENST00000641596 2535 ntBASIC15.52■□□□□ 0.08
CDH11P55287 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH11P55287 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH11P55287 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.52■□□□□ 0.08
CDH11P55287 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH11P55287 AL662844.4-201ENST00000606367 2838 ntBASIC15.52■□□□□ 0.08
CDH11P55287 AL391005.1-201ENST00000623953 2435 ntBASIC15.52■□□□□ 0.08
CDH11P55287 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH11P55287 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH11P55287 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH11P55287 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CDH11P55287 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CDH11P55287 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH11P55287 FDX1P1-201ENST00000449115 551 ntBASIC15.52■□□□□ 0.08
CDH11P55287 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH11P55287 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.52■□□□□ 0.08
CDH11P55287 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH11P55287 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.52■□□□□ 0.08
CDH11P55287 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH11P55287 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms