Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATXN3P54252 AC079328.2-201ENST00000561241 3354 ntBASIC17.32■□□□□ 0.36
ATXN3P54252 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 AC010460.3-201ENST00000511359 1579 ntBASIC17.32■□□□□ 0.36
ATXN3P54252 AC006504.4-201ENST00000592118 1568 ntBASIC17.32■□□□□ 0.36
ATXN3P54252 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.32■□□□□ 0.36
ATXN3P54252 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ATXN3P54252 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.32■□□□□ 0.36
ATXN3P54252 AL355312.1-201ENST00000407115 2176 ntBASIC17.32■□□□□ 0.36
ATXN3P54252 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.32■□□□□ 0.36
ATXN3P54252 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
ATXN3P54252 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
ATXN3P54252 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.32■□□□□ 0.36
ATXN3P54252 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ATXN3P54252 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.32■□□□□ 0.36
ATXN3P54252 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 CROCCP2-202ENST00000412962 2773 ntBASIC17.32■□□□□ 0.36
ATXN3P54252 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.32■□□□□ 0.36
ATXN3P54252 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATXN3P54252 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.31■□□□□ 0.36
ATXN3P54252 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ATXN3P54252 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.31■□□□□ 0.36
ATXN3P54252 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ATXN3P54252 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ATXN3P54252 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
ATXN3P54252 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.31■□□□□ 0.36
ATXN3P54252 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.31■□□□□ 0.36
ATXN3P54252 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 RPS15P9-201ENST00000494093 319 ntBASIC17.31■□□□□ 0.36
ATXN3P54252 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.31■□□□□ 0.36
ATXN3P54252 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.31■□□□□ 0.36
ATXN3P54252 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.31■□□□□ 0.36
ATXN3P54252 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
ATXN3P54252 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
ATXN3P54252 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ATXN3P54252 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATXN3P54252 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
ATXN3P54252 AC008741.2-201ENST00000612792 3115 ntBASIC17.31■□□□□ 0.36
ATXN3P54252 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.31■□□□□ 0.36
ATXN3P54252 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ATXN3P54252 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATXN3P54252 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ATXN3P54252 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 PCDH8P1-201ENST00000428983 2773 ntBASIC17.3■□□□□ 0.36
ATXN3P54252 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
ATXN3P54252 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATXN3P54252 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ATXN3P54252 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATXN3P54252 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
ATXN3P54252 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATXN3P54252 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.3■□□□□ 0.36
ATXN3P54252 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms