Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC23.82■■□□□ 1.4
CLTCL1P53675 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLTCL1P53675 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLTCL1P53675 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
CLTCL1P53675 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLTCL1P53675 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC23.81■■□□□ 1.4
CLTCL1P53675 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC23.81■■□□□ 1.4
CLTCL1P53675 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC23.81■■□□□ 1.4
CLTCL1P53675 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLTCL1P53675 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC23.81■■□□□ 1.4
CLTCL1P53675 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC23.81■■□□□ 1.4
CLTCL1P53675 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLTCL1P53675 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC23.81■■□□□ 1.4
CLTCL1P53675 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CLTCL1P53675 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLTCL1P53675 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CLTCL1P53675 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLTCL1P53675 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLTCL1P53675 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CLTCL1P53675 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC23.81■■□□□ 1.4
CLTCL1P53675 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLTCL1P53675 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLTCL1P53675 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CLTCL1P53675 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLTCL1P53675 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC23.81■■□□□ 1.4
CLTCL1P53675 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLTCL1P53675 AC120498.9-201ENST00000339021 3867 ntBASIC23.81■■□□□ 1.4
CLTCL1P53675 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLTCL1P53675 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC23.81■■□□□ 1.4
CLTCL1P53675 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLTCL1P53675 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC23.81■■□□□ 1.4
CLTCL1P53675 PIN1P1-201ENST00000412108 996 ntBASIC23.81■■□□□ 1.4
CLTCL1P53675 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC23.81■■□□□ 1.4
CLTCL1P53675 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC23.81■■□□□ 1.4
CLTCL1P53675 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC23.81■■□□□ 1.4
CLTCL1P53675 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLTCL1P53675 AL645728.1-201ENST00000366221 2101 ntBASIC23.8■■□□□ 1.4
CLTCL1P53675 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLTCL1P53675 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CLTCL1P53675 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLTCL1P53675 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLTCL1P53675 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC23.8■■□□□ 1.4
CLTCL1P53675 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC23.8■■□□□ 1.4
CLTCL1P53675 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CLTCL1P53675 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CLTCL1P53675 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLTCL1P53675 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLTCL1P53675 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CLTCL1P53675 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLTCL1P53675 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
CLTCL1P53675 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC23.8■■□□□ 1.4
CLTCL1P53675 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLTCL1P53675 AL596325.1-201ENST00000563991 1082 ntBASIC23.8■■□□□ 1.4
CLTCL1P53675 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC23.8■■□□□ 1.4
CLTCL1P53675 AL589739.1-201ENST00000607720 493 ntBASIC23.8■■□□□ 1.4
CLTCL1P53675 BANP-227ENST00000626016 2144 ntTSL 2 BASIC23.8■■□□□ 1.4
CLTCL1P53675 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLTCL1P53675 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLTCL1P53675 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLTCL1P53675 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
CLTCL1P53675 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CLTCL1P53675 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLTCL1P53675 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CLTCL1P53675 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
CLTCL1P53675 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLTCL1P53675 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLTCL1P53675 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLTCL1P53675 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLTCL1P53675 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLTCL1P53675 EDF1-203ENST00000371649 790 ntTSL 2 BASIC23.79■■□□□ 1.4
CLTCL1P53675 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLTCL1P53675 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLTCL1P53675 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLTCL1P53675 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLTCL1P53675 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC23.79■■□□□ 1.4
CLTCL1P53675 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CLTCL1P53675 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLTCL1P53675 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLTCL1P53675 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLTCL1P53675 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CLTCL1P53675 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC23.78■■□□□ 1.4
CLTCL1P53675 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC23.78■■□□□ 1.4
CLTCL1P53675 GPAA1P2-202ENST00000606848 1787 ntBASIC23.78■■□□□ 1.4
CLTCL1P53675 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
CLTCL1P53675 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CLTCL1P53675 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC23.78■■□□□ 1.4
CLTCL1P53675 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC23.78■■□□□ 1.4
CLTCL1P53675 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC23.78■■□□□ 1.4
CLTCL1P53675 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC23.78■■□□□ 1.4
CLTCL1P53675 AC098859.1-201ENST00000502915 1238 ntBASIC23.78■■□□□ 1.4
CLTCL1P53675 API5-211ENST00000534695 560 ntTSL 5 BASIC23.78■■□□□ 1.4
CLTCL1P53675 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CLTCL1P53675 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLTCL1P53675 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLTCL1P53675 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLTCL1P53675 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CLTCL1P53675 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CLTCL1P53675 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLTCL1P53675 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC23.78■■□□□ 1.4
CLTCL1P53675 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms