Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP98P52948 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUP98P52948 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.74■□□□□ 0.91
NUP98P52948 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUP98P52948 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.74■□□□□ 0.91
NUP98P52948 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUP98P52948 AL031731.1-201ENST00000642131 2094 ntBASIC20.74■□□□□ 0.91
NUP98P52948 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUP98P52948 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
NUP98P52948 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.74■□□□□ 0.91
NUP98P52948 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUP98P52948 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUP98P52948 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
NUP98P52948 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.74■□□□□ 0.91
NUP98P52948 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUP98P52948 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUP98P52948 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.74■□□□□ 0.91
NUP98P52948 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.74■□□□□ 0.91
NUP98P52948 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.74■□□□□ 0.91
NUP98P52948 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUP98P52948 AC104794.3-201ENST00000566840 1248 ntBASIC20.74■□□□□ 0.91
NUP98P52948 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.74■□□□□ 0.91
NUP98P52948 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.74■□□□□ 0.91
NUP98P52948 AC105021.1-202ENST00000570572 669 ntBASIC20.74■□□□□ 0.91
NUP98P52948 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUP98P52948 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.73■□□□□ 0.91
NUP98P52948 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUP98P52948 AL133373.2-201ENST00000623187 2828 ntBASIC20.73■□□□□ 0.91
NUP98P52948 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUP98P52948 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUP98P52948 AL035456.1-201ENST00000456064 1369 ntBASIC20.73■□□□□ 0.91
NUP98P52948 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.73■□□□□ 0.91
NUP98P52948 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUP98P52948 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NUP98P52948 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUP98P52948 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUP98P52948 AL645728.1-201ENST00000366221 2101 ntBASIC20.73■□□□□ 0.91
NUP98P52948 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUP98P52948 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.73■□□□□ 0.91
NUP98P52948 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC20.73■□□□□ 0.91
NUP98P52948 API5-211ENST00000534695 560 ntTSL 5 BASIC20.73■□□□□ 0.91
NUP98P52948 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.73■□□□□ 0.91
NUP98P52948 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.73■□□□□ 0.91
NUP98P52948 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NUP98P52948 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.73■□□□□ 0.91
NUP98P52948 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUP98P52948 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUP98P52948 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUP98P52948 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUP98P52948 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.72■□□□□ 0.91
NUP98P52948 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.72■□□□□ 0.91
NUP98P52948 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.72■□□□□ 0.91
NUP98P52948 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NUP98P52948 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUP98P52948 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUP98P52948 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUP98P52948 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
NUP98P52948 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.72■□□□□ 0.91
NUP98P52948 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.72■□□□□ 0.91
NUP98P52948 AL596325.1-201ENST00000563991 1082 ntBASIC20.72■□□□□ 0.91
NUP98P52948 AC024267.1-201ENST00000582320 895 ntBASIC20.72■□□□□ 0.91
NUP98P52948 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.72■□□□□ 0.91
NUP98P52948 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUP98P52948 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.72■□□□□ 0.91
NUP98P52948 AL662799.1-202ENST00000614205 422 ntBASIC20.72■□□□□ 0.91
NUP98P52948 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.72■□□□□ 0.91
NUP98P52948 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUP98P52948 AC087499.5-201ENST00000452760 1342 ntBASIC20.72■□□□□ 0.91
NUP98P52948 AC063926.2-201ENST00000623766 1308 ntBASIC20.72■□□□□ 0.91
NUP98P52948 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUP98P52948 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUP98P52948 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NUP98P52948 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUP98P52948 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUP98P52948 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUP98P52948 KRT8P12-202ENST00000472924 1397 ntBASIC20.72■□□□□ 0.91
NUP98P52948 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.72■□□□□ 0.91
NUP98P52948 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.72■□□□□ 0.91
NUP98P52948 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP98P52948 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP98P52948 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.71■□□□□ 0.91
NUP98P52948 AC007274.1-201ENST00000439805 662 ntBASIC20.71■□□□□ 0.91
NUP98P52948 AC009407.1-201ENST00000568958 598 ntBASIC20.71■□□□□ 0.91
NUP98P52948 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
NUP98P52948 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP98P52948 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NUP98P52948 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.71■□□□□ 0.91
NUP98P52948 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.71■□□□□ 0.91
NUP98P52948 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP98P52948 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NUP98P52948 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
NUP98P52948 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.71■□□□□ 0.91
NUP98P52948 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NUP98P52948 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NUP98P52948 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.71■□□□□ 0.91
NUP98P52948 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.71■□□□□ 0.91
NUP98P52948 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.71■□□□□ 0.91
NUP98P52948 SPDYE18-201ENST00000510091 1050 ntBASIC20.71■□□□□ 0.91
NUP98P52948 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.71■□□□□ 0.91
NUP98P52948 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms