Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
GTF2A1P52655 PNMA6B-201ENST00000538162 1200 ntBASIC16.62■□□□□ 0.25
GTF2A1P52655 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.62■□□□□ 0.25
GTF2A1P52655 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.62■□□□□ 0.25
GTF2A1P52655 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GTF2A1P52655 HLA-B-256ENST00000639848 1089 ntBASIC16.62■□□□□ 0.25
GTF2A1P52655 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GTF2A1P52655 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GTF2A1P52655 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
GTF2A1P52655 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GTF2A1P52655 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GTF2A1P52655 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
GTF2A1P52655 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.62■□□□□ 0.25
GTF2A1P52655 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GTF2A1P52655 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
GTF2A1P52655 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GTF2A1P52655 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2A1P52655 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2A1P52655 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.61■□□□□ 0.25
GTF2A1P52655 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2A1P52655 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
GTF2A1P52655 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2A1P52655 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.61■□□□□ 0.25
GTF2A1P52655 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
GTF2A1P52655 RCC2P6-201ENST00000526625 1557 ntBASIC16.61■□□□□ 0.25
GTF2A1P52655 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
GTF2A1P52655 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2A1P52655 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.61■□□□□ 0.25
GTF2A1P52655 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2A1P52655 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.61■□□□□ 0.25
GTF2A1P52655 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.61■□□□□ 0.25
GTF2A1P52655 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
GTF2A1P52655 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
GTF2A1P52655 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.61■□□□□ 0.25
GTF2A1P52655 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.61■□□□□ 0.25
GTF2A1P52655 AC083906.2-201ENST00000511578 360 ntBASIC16.61■□□□□ 0.25
GTF2A1P52655 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.61■□□□□ 0.25
GTF2A1P52655 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.61■□□□□ 0.25
GTF2A1P52655 AL160286.2-201ENST00000567150 934 ntBASIC16.61■□□□□ 0.25
GTF2A1P52655 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2A1P52655 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.61■□□□□ 0.25
GTF2A1P52655 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2A1P52655 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.61■□□□□ 0.25
GTF2A1P52655 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2A1P52655 ADAMTS7P1-201ENST00000613213 4793 ntBASIC16.61■□□□□ 0.25
GTF2A1P52655 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2A1P52655 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2A1P52655 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2A1P52655 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2A1P52655 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.61■□□□□ 0.25
GTF2A1P52655 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
GTF2A1P52655 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
GTF2A1P52655 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.6■□□□□ 0.25
GTF2A1P52655 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.6■□□□□ 0.25
GTF2A1P52655 DGCR9-201ENST00000609630 2415 ntBASIC16.6■□□□□ 0.25
GTF2A1P52655 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
GTF2A1P52655 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.6■□□□□ 0.25
GTF2A1P52655 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
GTF2A1P52655 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.6■□□□□ 0.25
GTF2A1P52655 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
GTF2A1P52655 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
GTF2A1P52655 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.6■□□□□ 0.25
GTF2A1P52655 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.6■□□□□ 0.25
GTF2A1P52655 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.6■□□□□ 0.25
GTF2A1P52655 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.6■□□□□ 0.25
GTF2A1P52655 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.6■□□□□ 0.25
GTF2A1P52655 IKBKGP1-201ENST00000612193 1073 ntBASIC16.6■□□□□ 0.25
GTF2A1P52655 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
GTF2A1P52655 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
GTF2A1P52655 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2A1P52655 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
GTF2A1P52655 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A1P52655 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.59■□□□□ 0.25
GTF2A1P52655 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A1P52655 AC005912.2-201ENST00000619492 2400 ntBASIC16.59■□□□□ 0.25
GTF2A1P52655 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GTF2A1P52655 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
GTF2A1P52655 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.59■□□□□ 0.25
GTF2A1P52655 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.59■□□□□ 0.25
GTF2A1P52655 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms